Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g28440 | A10 | 21778686 | G | A | upstream_gene_variant | MODIFIER | c.-2978G>A| |
S278 |
2 | BAA10g28440 | A10 | 21779406 | G | A | upstream_gene_variant | MODIFIER | c.-2258G>A| |
S127 |
3 | BAA10g28440 | A10 | 21779688 | C | T | upstream_gene_variant | MODIFIER | c.-1976C>T| |
S301 S304 |
4 | BAA10g28440 | A10 | 21780631 | G | A | upstream_gene_variant | MODIFIER | c.-1033G>A| |
S181 |
5 | BAA10g28440 | A10 | 21780730 | C | T | upstream_gene_variant | MODIFIER | c.-934C>T| |
S13 S168 S219 S279 S72 |
6 | BAA10g28440 | A10 | 21781346 | G | A | upstream_gene_variant | MODIFIER | c.-318G>A| |
S199 |
7 | BAA10g28440 | A10 | 21781568 | G | A | upstream_gene_variant | MODIFIER | c.-96G>A| |
S100 |
8 | BAA10g28440 | A10 | 21781807 | C | T | synonymous_variant | LOW | c.144C>T|p.Val48Val |
S129 |
9 | BAA10g28440 | A10 | 21782987 | G | A | intron_variant | MODIFIER | c.185+1139G>A| |
S57 |
10 | BAA10g28440 | A10 | 21784551 | C | T | intron_variant | MODIFIER | c.243+177C>T| |
S295 |
11 | BAA10g28440 | A10 | 21785525 | C | T | intron_variant | MODIFIER | c.489+100C>T| |
S295 |
12 | BAA10g28440 | A10 | 21785641 | C | T | intron_variant | MODIFIER | c.489+216C>T| |
S68 |
13 | BAA10g28440 | A10 | 21787527 | G | A | intron_variant | MODIFIER | c.570+1574G>A| |
S217 |
14 | BAA10g28440 | A10 | 21788865 | G | A | intron_variant | MODIFIER | c.571-252G>A| |
S88 |
15 | BAA10g28440 | A10 | 21789116 | G | A | splice_acceptor_variant&intron_variant | HIGH | c.571-1G>A| |
S134 |
16 | BAA10g28440 | A10 | 21789253 | G | A | missense_variant | MODERATE | c.707G>A|p.Gly236Glu |
S136 |
17 | BAA10g28440 | A10 | 21789649 | G | A | synonymous_variant | LOW | c.774G>A|p.Val258Val |
S127 |
18 | BAA10g28440 | A10 | 21789764 | C | T | missense_variant | MODERATE | c.889C>T|p.Pro297Ser |
S18 |
19 | BAA10g28440 | A10 | 21790159 | C | T | downstream_gene_variant | MODIFIER | c.*207C>T| |
S157 |
20 | BAA10g28440 | A10 | 21790450 | G | A | downstream_gene_variant | MODIFIER | c.*498G>A| |
S233 |
21 | BAA10g28440 | A10 | 21791000 | G | A | downstream_gene_variant | MODIFIER | c.*1048G>A| |
S132 S137 S215 S89 |
22 | BAA10g28440 | A10 | 21794201 | C | T | downstream_gene_variant | MODIFIER | c.*4249C>T| |
S51 |