Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAS38g00020 | Scaffold38 | 2102069 | G | A | upstream_gene_variant | MODIFIER | c.-4175G>A| |
S165 |
2 | BAS38g00020 | Scaffold38 | 2102110 | C | T | upstream_gene_variant | MODIFIER | c.-4134C>T| |
S19 |
3 | BAS38g00020 | Scaffold38 | 2102141 | C | T | upstream_gene_variant | MODIFIER | c.-4103C>T| |
S193 |
4 | BAS38g00020 | Scaffold38 | 2102229 | C | T | upstream_gene_variant | MODIFIER | c.-4015C>T| |
S295 |
5 | BAS38g00020 | Scaffold38 | 2103313 | C | T | upstream_gene_variant | MODIFIER | c.-2931C>T| |
S246 |
6 | BAS38g00020 | Scaffold38 | 2104041 | C | T | upstream_gene_variant | MODIFIER | c.-2203C>T| |
S38 |
7 | BAS38g00020 | Scaffold38 | 2106766 | G | A | missense_variant | MODERATE | c.523G>A|p.Glu175Lys |
S84 S93 |
8 | BAS38g00020 | Scaffold38 | 2110236 | C | T | synonymous_variant | LOW | c.1350C>T|p.Val450Val |
S197 |
9 | BAS38g00020 | Scaffold38 | 2112354 | G | A | downstream_gene_variant | MODIFIER | c.*1714G>A| |
S261 |
10 | BAS38g00020 | Scaffold38 | 2112757 | G | A | downstream_gene_variant | MODIFIER | c.*2117G>A| |
S179 |
11 | BAS38g00020 | Scaffold38 | 2112762 | C | T | downstream_gene_variant | MODIFIER | c.*2122C>T| |
S278 |
12 | BAS38g00020 | Scaffold38 | 2112888 | T | A | downstream_gene_variant | MODIFIER | c.*2248T>A| |
S244 |
13 | BAS38g00020 | Scaffold38 | 2113273 | C | T | downstream_gene_variant | MODIFIER | c.*2633C>T| |
S289 S290 |