Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g00010 | A01 | 250 | C | T | downstream_gene_variant | MODIFIER | c.*4237G>A| |
S252 |
2 | BAA01g00010 | A01 | 676 | C | T | downstream_gene_variant | MODIFIER | c.*3811G>A| |
S130 |
3 | BAA01g00010 | A01 | 959 | C | T | downstream_gene_variant | MODIFIER | c.*3528G>A| |
S166 |
4 | BAA01g00010 | A01 | 1281 | C | T | downstream_gene_variant | MODIFIER | c.*3206G>A| |
S107 |
5 | BAA01g00010 | A01 | 1782 | G | A | downstream_gene_variant | MODIFIER | c.*2705C>T| |
S30 S31 |
6 | BAA01g00020 | A01 | 2038 | G | A | upstream_gene_variant | MODIFIER | c.-4862G>A| |
S44 |
7 | BAA01g00020 | A01 | 2079 | G | A | upstream_gene_variant | MODIFIER | c.-4821G>A| |
S228 |
8 | BAA01g00020 | A01 | 2666 | G | A | upstream_gene_variant | MODIFIER | c.-4234G>A| |
S173 |
9 | BAA01g00020 | A01 | 3408 | C | T | upstream_gene_variant | MODIFIER | c.-3492C>T| |
S277 S41 |
10 | BAA01g00020 | A01 | 3983 | G | A | upstream_gene_variant | MODIFIER | c.-2917G>A| |
S181 |
11 | BAA01g00020 | A01 | 4262 | G | A | upstream_gene_variant | MODIFIER | c.-2638G>A| |
S136 |
12 | BAA01g00020 | A01 | 4469 | C | T | upstream_gene_variant | MODIFIER | c.-2431C>T| |
S249 |
13 | BAA01g00010 | A01 | 5681 | C | T | missense_variant | MODERATE | c.562G>A|p.Glu188Lys |
S25 |
14 | BAA01g00010 | A01 | 5717 | G | A | missense_variant | MODERATE | c.526C>T|p.Leu176Phe |
S34 |
15 | BAA01g00010 | A01 | 5953 | G | A | synonymous_variant | LOW | c.373C>T|p.Leu125Leu |
S23 |
16 | BAA01g00020 | A01 | 6140 | C | T | upstream_gene_variant | MODIFIER | c.-760C>T| |
S159 S243 |
17 | BAA01g00010 | A01 | 6647 | G | A | upstream_gene_variant | MODIFIER | c.-161C>T| |
S289 S290 |
18 | BAA01g00020 | A01 | 7771 | C | T | missense_variant | MODERATE | c.167C>T|p.Ala56Val |
S137 |
19 | BAA01g00020 | A01 | 7860 | C | T | missense_variant | MODERATE | c.256C>T|p.Arg86Cys |
S233 |
20 | BAA01g00010 | A01 | 9135 | G | A | upstream_gene_variant | MODIFIER | c.-2649C>T| |
S87 |
21 | BAA01g00010 | A01 | 10247 | G | A | upstream_gene_variant | MODIFIER | c.-3761C>T| |
S136 |
22 | BAA01g00040 | A01 | 12036 | C | T | upstream_gene_variant | MODIFIER | c.-4440C>T| |
S74 |
23 | BAA01g00040 | A01 | 12897 | C | T | upstream_gene_variant | MODIFIER | c.-3579C>T| |
S185 |
24 | BAA01g00030 | A01 | 17781 | C | T | upstream_gene_variant | MODIFIER | c.-4012G>A| |
S264 |
25 | BAA01g00040 | A01 | 18566 | G | A | synonymous_variant | LOW | c.1266G>A|p.Gln422Gln |
S172 S217 |