| Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
|---|---|---|---|---|---|---|---|---|---|
| 79401 | BAA01g41750-BAA01g41760 | A01 | 27770057 | C | A | intergenic_region | MODIFIER | n.27770057C>A| |
S116 S121 S174 S217 S255 S26 S35 S43 S71 S90 |
| 79402 | BAA01g41750-BAA01g41760 | A01 | 27770105 | G | A | intergenic_region | MODIFIER | n.27770105G>A| |
S121 S174 S184 S255 S271 S35 S38 S90 |
| 79403 | BAA01g41750-BAA01g41760 | A01 | 27771456 | C | A | intergenic_region | MODIFIER | n.27771456C>A| |
S114 S121 S124 S131 S151 S180 S184 S20 S246 S249 S250 S251 S28 S290 S299 S40 S44 S52 S92 |
| 79404 | BAA01g41750-BAA01g41760 | A01 | 27784346 | C | T | intergenic_region | MODIFIER | n.27784346C>T| |
S16 |
| 79405 | BAA01g41750-BAA01g41760 | A01 | 27785575 | C | T | intergenic_region | MODIFIER | n.27785575C>T| |
S201 |
| 79406 | BAA01g41760 | A01 | 27793939 | C | T | downstream_gene_variant | MODIFIER | c.*4177G>A| |
S107 |
| 79407 | BAA01g41760 | A01 | 27798519 | G | A | missense_variant | MODERATE | c.488C>T|p.Pro163Leu |
S3 |
| 79408 | BAA01g41760 | A01 | 27798576 | C | T | missense_variant | MODERATE | c.431G>A|p.Cys144Tyr |
S48 |
| 79409 | BAA01g41770 | A01 | 27799705 | C | T | upstream_gene_variant | MODIFIER | c.-1974C>T| |
S174 S27 |
| 79410 | BAA01g41760 | A01 | 27800267 | G | A | upstream_gene_variant | MODIFIER | c.-190C>T| |
S199 |
| 79411 | BAA01g41760 | A01 | 27800661 | C | T | upstream_gene_variant | MODIFIER | c.-584G>A| |
S171 |
| 79412 | BAA01g41760 | A01 | 27802777 | G | A | upstream_gene_variant | MODIFIER | c.-2700C>T| |
S263 |
| 79413 | BAA01g41760 | A01 | 27803237 | C | T | upstream_gene_variant | MODIFIER | c.-3160G>A| |
S302 |
| 79414 | BAA01g41760 | A01 | 27803959 | G | A | upstream_gene_variant | MODIFIER | c.-3882C>T| |
S217 S248 |
| 79415 | BAA01g41780 | A01 | 27805370 | A | T | upstream_gene_variant | MODIFIER | c.-567A>T| |
S174 S216 S241 S27 S39 |
| 79416 | BAA01g41780 | A01 | 27805888 | G | A | upstream_gene_variant | MODIFIER | c.-49G>A| |
S42 |
| 79417 | BAA01g41790 | A01 | 27806726 | C | T | upstream_gene_variant | MODIFIER | c.-2795C>T| |
S255 |
| 79418 | BAA01g41780 | A01 | 27807136 | C | T | synonymous_variant | LOW | c.534C>T|p.Tyr178Tyr |
S287 |
| 79419 | BAA01g41780 | A01 | 27807169 | G | A | synonymous_variant | LOW | c.567G>A|p.Ser189Ser |
S114 |
| 79420 | BAA01g41790 | A01 | 27808643 | G | A | upstream_gene_variant | MODIFIER | c.-878G>A| |
S257 |
| 79421 | BAA01g41790 | A01 | 27809389 | C | T | upstream_gene_variant | MODIFIER | c.-132C>T| |
S161 |
| 79422 | BAA01g41800 | A01 | 27810107 | C | T | upstream_gene_variant | MODIFIER | c.-3600C>T| |
S187 S243 S276 |
| 79423 | BAA01g41800 | A01 | 27810154 | C | T | upstream_gene_variant | MODIFIER | c.-3553C>T| |
S167 |
| 79424 | BAA01g41790 | A01 | 27810416 | G | A | missense_variant | MODERATE | c.457G>A|p.Asp153Asn |
S71 |
| 79425 | BAA01g41790 | A01 | 27810703 | G | A | stop_gained | HIGH | c.744G>A|p.Trp248* |
S96 |